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ABOUT THIS RECORD

ID: MNEST003817
species: Oryza sativa
miRNA family: MIR446
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CATTAATATGAATATGGGAAA

miRNA*
TCTCATATTCATATTGATGCT

mismatches: 0
bulges: 0

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pre-miRNA
ATCATGCTACTAATTACTTCCTCCGTTTTACAATGTAAGTCATTCTGGCATTTCTCATATTCATATTGATGCTAACGAATCTAGACATATATATCCATCT
AGATTCATTAACATTAATATGAATATGGGAAATGTTAGAATGACTTACATTGTGAAACTGGAGGAAGTAGCAATTAAAAAT


dot-bracket secondary structure
....(((((((.......(((((((((((((((((((((((((((((((((((((((((((((((((((((.(((.(((((((((............)))
)))))).))).))))))))))))))))))))))))))))))))))))))))))))))).))))))))))))).........



SIMILARITIES
miRBase osa-MIR809d: 2e-49

PMRD osa-miR809d: 2e-49

microPC miR809: 1e-51
UniProt no hits

RFAM MIR1122: 5e-51
most similar mature miRNAs

Identical with: miR809 from microPC (MNEST045342)

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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