ABOUT THIS RECORDspecies: Oryza sativa
miRNA family: MIR446
source: miRNEST
Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CATCAACATGAATATGGGAAA miRNA* TTTCACATTCATATTGTCTAG mismatches: 5 bulges: 0 |
pre-miRNA
ATTTTAGCATTTTTCACATTCATATTGTCTAGATTCATTAACATCAACATGAATATGGGAAATGTTAGAA
dot-bracket secondary structure
.(((((((((((((((.((((((.(((..(((.....)))....))).)))))).)))))))))))))))
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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ATTTTAGCATTTTTCACATTCATATTGTCTAGATTCATTAACATCAACATGAATATGGGAAATGTTAGAA
dot-bracket secondary structure
.(((((((((((((((.((((((.(((..(((.....)))....))).)))))).)))))))))))))))
SIMILARITIES| miRBase osa-MIR809h: 0.00000000000001 PMRD osa-miR809h: 0.00000000000001 microPC miR808: 0.0000000000002 | UniProt no hits RFAM MIR1122: 0.00000000000006 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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