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ABOUT THIS RECORD

ID: MNEST003820
species: Oryza sativa
miRNA family: MIR446
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CATCAATATGAATGTGGGAGA

miRNA*
 TTCCACATTTATATTGATTCA

mismatches: 1
bulges: 0
View larger
pre-miRNA
 GGTTAATTAATTAGTACTCCTTCCGTTTCACAATGTAAGTCATTATAGCATTTTCCACATTTATATTGATTCATTAACATCAATATGAATGTGGGAGATG
CTAGAATNACTTACATTGTAAAACGAAGTAAGTACTCCTGTACATAC

dot-bracket secondary structure
............((((((.((((.((((.(((((((((((.(((.(((((((((((((((((((((((((........))))))))))))))))))))))
))).))).))))))))))).))))))))..))))))...........


SIMILARITIES
miRBase osa-MIR809d: 3e-20

PMRD osa-miR809d: 3e-20

microPC miR809: 0.00000000003		UniProt no hits

RFAM MIR1122: 3e-36		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
Source sequences
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