ABOUT THIS RECORDspecies: Oryza sativa
miRNA family: MIR446
source: miRNEST
Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CATCAATATGAATGTGGGAGA miRNA* TCCCACATTCATATTGAAGTT mismatches: 1 bulges: 0 |
pre-miRNA
AACTGTACTCCCTCCATTTCACAATTTAAGTCATTCTAGCATTTCCCACATTCATATTGAAGTTGAGGAATGTANACATATATATCTATCTAGATTCATT
AACATCAATATGAATGTGGGAGATGCTAAAATGACTTACATTGTGGAATGGAGGAAGTATGTA
dot-bracket secondary structure
....(((((.(((((((((((((((.(((((((((.((((((((((((((((((((((((.(((((.((((......................)))).))
))).)))))))))))))))))))))))).))))))))).))))))))))))))).)))))...
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
Source sequences
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AACTGTACTCCCTCCATTTCACAATTTAAGTCATTCTAGCATTTCCCACATTCATATTGAAGTTGAGGAATGTANACATATATATCTATCTAGATTCATT
AACATCAATATGAATGTGGGAGATGCTAAAATGACTTACATTGTGGAATGGAGGAAGTATGTA
dot-bracket secondary structure
....(((((.(((((((((((((((.(((((((((.((((((((((((((((((((((((.(((((.((((......................)))).))
))).)))))))))))))))))))))))).))))))))).))))))))))))))).)))))...
SIMILARITIES| miRBase osa-MIR808: 2e-52 PMRD osa-miR808: 2e-52 microPC miR809: 2e-21 | UniProt no hits RFAM MIR1122: 2e-50 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
Source sequences
download this record
