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ABOUT THIS RECORD

ID: MNEST003838
species: Oryza sativa
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTACTCCCTTCGTCCCACAAA

miRNA*
 TATGGGATGGAGGGAGTACTT

mismatches: 2
bulges: 0
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pre-miRNA
 ATGCTTCTGAATTACTCCCTTCGTCCCACAAAAAATCAACCTACTATTGGAGGTGATATTTCCTAATACAACGAATCTGAACAGAAGGTTGCCTAGATTC
GTTATACTAGGGAATGTCACCTCTAATACCAGATTGGTTTTTTATGGGATGGAGGGAGTACTTGG

dot-bracket secondary structure
.........((.((((((((((((((((.((((((((((.((..(((((((((((((((((((((.((.(((((((((((((.....)))...)))))))
))).)).)))))))))))))))))))))..)).)))))))))).)))))))))))))))).))..


SIMILARITIES
miRBase osa-MIR1442: 0.0005

PMRD osa-miRf10842-akr: 0.0000005

microPC miR1436: 0.00003		UniProt no hits

RFAM MIR1122: 9e-77		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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