ABOUT THIS RECORDspecies: Oryza sativa
miRNA family: MIRf1376
source: miRNEST
Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AGGGATTAACTGAACAAAGCC miRNA* CTTGTTTGGTTAATCCCCAT mismatches: 1 bulges: 1 |
pre-miRNA
TCTCTTTTAGGGCTTGTTTGGTTAATCCCCATGAGGGAGGGAATTGGAGGGGATTAATTCCACACCCCTTCAATTCCCTTGTGGGAGGGATTAACTGAAC
AAAGCCTTAATGGAA
dot-bracket secondary structure
..(((.(((((((((((((((((((((((..((...((((((((((((((((............)))))))))))))))).))...))))))))))))))
.))))))))).))).
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TCTCTTTTAGGGCTTGTTTGGTTAATCCCCATGAGGGAGGGAATTGGAGGGGATTAATTCCACACCCCTTCAATTCCCTTGTGGGAGGGATTAACTGAAC
AAAGCCTTAATGGAA
dot-bracket secondary structure
..(((.(((((((((((((((((((((((..((...((((((((((((((((............)))))))))))))))).))...))))))))))))))
.))))))))).))).
SIMILARITIES| miRBase no hits PMRD osa-miRf10822-akr: 0.000001 microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
