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ABOUT THIS RECORD
ID:
MNEST003851
species:
Oryza sativa
miRNA family:
MIRf38
source:
miRNEST
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GACGAGTGGTCAAACAGTGCA
miRNA*
TACTGTTTGGCCATTCGTGTT
mismatches:
1
bulges:
0
View larger
pre-miRNA
ACATTTTACTTG
TACTGTTTGGCCATTCGTGTT
ATTCAAAAAAATTTAGAATTATTATTTATTTTATTTGTGACTTACTTTATTATCCAAAGTACTTCAA
GCACAACTTCTCTTTTTCTATATTTGCACAATTTCTTTAAATAA
GACGAGTGGTCAAACAGTGCA
AACAAAATG
dot-bracket secondary structure
.((((((..(((
((((((((((((((((((.((
(((.(((.(((((..((((...............(((((.((((((((.......)))))).....)
))))))...............))))....))))).))).)))))
.))))))))))))))))))))
)..))))))
SIMILARITIES
miRBase
osa-MIR818e
:
0.00000000000001
PMRD
osa-miRf10207-akr
:
4e-23
microPC
miR818
:
0.0001
UniProt
no hits
RFAM
MIR812: 1e-26
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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