ABOUT THIS RECORDspecies: Oryza sativa
miRNA family: MIRf1700
source: miRNEST
Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCGCCGTCAACTGCGAGGTCG miRNA* ACCTCCGCGCCGGCGGCGACG mismatches: 2 bulges: 2 |
pre-miRNA
GACCAAGCCGATCGCCGTCAACTGCGAGGTCGTGCTGTTCGACCACCTACTGTGGATGCTGGACAACGCCGTCGACCTCCGCGCCGGCGGCGACGGCGAC
GAC
dot-bracket secondary structure
......((((.((((((((...((((((((((.((((((((.((((.....))))....))))))..))...)))))).))))..))))))))))))...
...
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets
HuntMi prediction: not a miRNA
Source sequences
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GACCAAGCCGATCGCCGTCAACTGCGAGGTCGTGCTGTTCGACCACCTACTGTGGATGCTGGACAACGCCGTCGACCTCCGCGCCGGCGGCGACGGCGAC
GAC
dot-bracket secondary structure
......((((.((((((((...((((((((((.((((((((.((((.....))))....))))))..))...)))))).))))..))))))))))))...
...
SIMILARITIES| miRBase no hits PMRD osa-miRf12010-akr: 1e-46 microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
Identical with: osa-miRf12010-akr from PMRD (MNEST051225) |
MOREmiRNEST target predictions
non-miRNEST targets
HuntMi prediction: not a miRNA
Source sequences
download this record
