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ABOUT THIS RECORD

ID: MNEST003854
species: Oryza sativa
miRNA family: MIRf34
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ATGACTTATATTGTGAAACGA

miRNA*
 GTTTCACAATGTAAGTCATTC

mismatches: 1
bulges: 0
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pre-miRNA
 ATCAGTATTCAGTACTTCCTCCGTTTCACAATGTAAGTCATTCTAGTATTCACNATATTTATATTGNTCNTGATGAATTTAAATAGATATATGTCTAGAT
TCATTAATATAAATATGAATGTGAAAAATGCTAGAATGACTTATATTGTGAAACGAAGGGAGTAGATGTTTGGAG

dot-bracket secondary structure
.((((....((.((((((((.((((((((((((((((((((((((((((((((...(((((((((.....(((((((((((.(((......))).)))))
)))))).....)))))))))))))...)))))))))))))))))))))))))))).))))))))..)).))))..


SIMILARITIES
miRBase osa-MIR809d: 2e-31

PMRD osa-miR809d: 2e-31

microPC miR809: 9e-43		UniProt sp|Q6K1U0|P2C17_ORYSJ: 0.0002

RFAM MIR1122: 4e-33		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
Source sequences
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