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ABOUT THIS RECORD

ID: MNEST003856
species: Oryza sativa
miRNA family: MIRf34
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
ATGACTTACATTGTGAAACAG

miRNA*
TTTTCAGGATATAAGTCATTT

mismatches: 5
bulges: 0

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pre-miRNA
TGTCCTCCTCCGTTTTCAGGATATAAGTCATTTTAGTATTTTCCACAAAAGTATTTAAGGTTAAATAATTTAGAAAAAAAAAAAAAATTTCTAAATTCAT
TAACATCAAAATAAATATGAGAAATATTAAAATGACTTACATTGTGAAACAGAGGGAGTAC


dot-bracket secondary structure
.....(((((.((((.((.(((.(((((((((((((((((((.((......(((((...(((((..((((((((((...........))))))))))..)
))))....)))))....)).))))))))))))))))))).))).)))))).))))).....



SIMILARITIES
miRBase osa-MIR809d: 0.000000000000002

PMRD osa-miR809d: 0.000000000000002

microPC miR446: 0.0005
UniProt no hits

RFAM MIR1122: 2e-19
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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