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ABOUT THIS RECORD

ID: MNEST003876
species: Oryza sativa
miRNA family: MIR818
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AATCCCTTATAATATGGGATA

miRNA*
TCCCTTATAATATGGATCCA

mismatches: 5
bulges: 1

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pre-miRNA
CATCTACCCAAAATCCCTTATAATATGGGATATGTCACATCCACCCAAATCCCTTATAATATGGATCCACCCACAAT

dot-bracket secondary structure
............((((..(((.(((.(((((.((...........)).))))).))).))).))))...........


SIMILARITIES
miRBase osa-MIR818a: 0.00001

PMRD osa-miRf11090-akr: 0.000003

microPC no hits
UniProt no hits

RFAM MIR1122: 0.000000001
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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