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ABOUT THIS RECORD
ID:
MNEST003876
species:
Oryza sativa
miRNA family:
MIR818
source:
miRNEST
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AATCCCTTATAATATGGGATA
miRNA*
TCCCTTATAATATGGATCCA
mismatches:
5
bulges:
1
View larger
pre-miRNA
CATCTACCCAA
AATCCCTTATAATATGGGATA
TGTCACATCCACCCAAA
TCCCTTATAATATGGATCCA
CCCACAAT
dot-bracket secondary structure
...........
.((((..(((.(((.(((((.
((...........)).)
)))).))).))).))))...
........
SIMILARITIES
miRBase
osa-MIR818a
:
0.00001
PMRD
osa-miRf11090-akr
:
0.000003
microPC
no hits
UniProt
no hits
RFAM
MIR1122: 0.000000001
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
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