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ABOUT THIS RECORD
ID:
MNEST003884
species:
Oryza sativa
miRNA family:
MIR1846
source:
miRNEST
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CAACGAGGAGGCCGGGACCGC
miRNA*
GACTCCGGCCTCCTCGCCGGC
mismatches:
4
bulges:
0
View larger
pre-miRNA
GCCGCATACGC
CAACGAGGAGGCCGGGACCGC
CGGATCCGGT
GACTCCGGCCTCCTCGCCGGC
AGATCCGG
dot-bracket secondary structure
.(((.((..((
(..(((((((((((((..(((
((....))))
)..)))))))))))))..)))
..)).)))
SIMILARITIES
miRBase
osa-MIR1846e
:
7e-29
PMRD
osa-miR1846e
:
7e-29
microPC
miR1846
:
9e-16
UniProt
no hits
RFAM
MIR1846: 7e-26
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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