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ABOUT THIS RECORD

ID: MNEST003884
species: Oryza sativa
miRNA family: MIR1846
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CAACGAGGAGGCCGGGACCGC

miRNA*
GACTCCGGCCTCCTCGCCGGC

mismatches: 4
bulges: 0

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pre-miRNA
GCCGCATACGCCAACGAGGAGGCCGGGACCGCCGGATCCGGTGACTCCGGCCTCCTCGCCGGCAGATCCGG

dot-bracket secondary structure
.(((.((..(((..(((((((((((((..(((((....)))))..)))))))))))))..)))..)).)))


SIMILARITIES
miRBase osa-MIR1846e: 7e-29

PMRD osa-miR1846e: 7e-29

microPC miR1846: 9e-16
UniProt no hits

RFAM MIR1846: 7e-26
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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