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ABOUT THIS RECORD

ID: MNEST003885
species: Oryza sativa
miRNA family: MIR1846
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CAACGAGGAGGCCGGGACCA

miRNA*
ACTCCGGCCTCCTCGCCGGC

mismatches: 4
bulges: 0

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pre-miRNA
GCCATCCTCTCGCACTCGCCGCCGCATCCGCCAACGAGGAGGCCGGGACCACCGGATCCGGTGACTCCGGCCTCCTCGCCGGCAGATCCGGCCACTCTGA
GGCGAGGGGGT


dot-bracket secondary structure
...((((((((((.((((..((((.(((.(((..(((((((((((((..(((((....)))))..)))))))))))))..))).))).)))).....)))
)))))))))))



SIMILARITIES
miRBase osa-MIR1846e: 2e-33

PMRD osa-miR1846e: 2e-33

microPC miR1846: 0.0000000000004
UniProt no hits

RFAM MIR1846: 1e-25
most similar mature miRNAs

Identical with: osa-miR1846e from PMRD (MNEST049127)

MORE

miRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
Source sequences
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