ABOUT THIS RECORDspecies: Oryza sativa
miRNA family: MIR444
source: miRNEST
Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTGTGGCTTTCTTGCAAGTGT miRNA* ACTTGTGTTTTGGCTGCTGCT mismatches: 5 bulges: 0 |
pre-miRNA
GAGGTGCAGAATACTTGTGTTTTGGCTGCTGCTGTTTGGTTGTGGCTTTCTTGCAAGTGTTCGAGCTAT
dot-bracket secondary structure
..(((...(((((((((((....((((((.(((....))).))))))....)))))))))))..)))..
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GAGGTGCAGAATACTTGTGTTTTGGCTGCTGCTGTTTGGTTGTGGCTTTCTTGCAAGTGTTCGAGCTAT
dot-bracket secondary structure
..(((...(((((((((((....((((((.(((....))).))))))....)))))))))))..)))..
SIMILARITIES| miRBase tae-MIR444b: 0.0007 PMRD tae-miR2024b: 0.0007 microPC miR444: 0.0007 | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
