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ABOUT THIS RECORD

ID: MNEST003898
species: Oryza sativa
miRNA family: MIRf34
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
ATGTGGGCAATGCTAGNAAGT

miRNA*
TTTTTAGCATTACCCATACAT

mismatches: 3
bulges: 0

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pre-miRNA
GGNAAATACTTCCCTGTTTCATATTATANAACTTTTTAGCATTACCCATACATTCATATATNTATGTTAATANATCTAGATATATATGTATGCCTAGATT
TATTAACATCTATATGAATGAATGTGGGCAATGCTAGNAAGTTTTATANCCTGAAATGGAGGTAGTAATAA


dot-bracket secondary structure
......((((.((((((((((...((((.(((((.((((((((.((((((((((((((((...(((((((((.((((((.((((....)))).)))))).
))))))))).))))))))))..)))))).)))))))).))))).))))...)))))))).)).))))....



SIMILARITIES
miRBase osa-MIR819j: 7e-31

PMRD osa-miR819j: 7e-31

microPC miR809: 0.0000000006
UniProt no hits

RFAM MIR1122: 1e-17
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
Source sequences
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