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ABOUT THIS RECORD
ID:
MNEST003911
species:
Oryza sativa
miRNA family:
MIR806
source:
miRNEST
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTTTAATAAGACGAACGGTCA
miRNA*
ACCATTCATCTGATTCAGAAA
mismatches:
4
bulges:
0
View larger
pre-miRNA
ACCTCCGATATTGGACGCCATGACTTTTTTAAATAGAGGTG
ACCATTCATCTGATTCAGAAA
CTTTTGTAAATATGTAAAACGATATATATAGACATAAA
AATATATTTAACAATAAATCAAATGATAGGAAAAGATTAATAATTACTGATATTTTT
TTTTAATAAGACGAACGGTCA
GCATATTTAAAAAAGTCAACTA
CGTCAAATATTTTGGGA
dot-bracket secondary structure
.(((..((((((.((((...(((((((((((((((...(((
(((.(((.(((.(((.(((((
.((.(((..(((((((......)))))))..))).))(
(((((...(((..((.((((..............)))).))..)))...))))))))
))).))).))).))).)))))
.).)))))))))))))))....
)))).))))))..))).
SIMILARITIES
miRBase
osa-MIR806h
:
3e-18
PMRD
osa-miR806h
:
3e-18
microPC
miR806
:
0.000000000000003
UniProt
no hits
RFAM
MIR806: 3e-62
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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