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ABOUT THIS RECORD

ID: MNEST003912
species: Oryza sativa
miRNA family: MIR806
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTTTAATAAGACGAACGGTTA

miRNA*
 ATCATTCGTCTTATTTAAAA

mismatches: 2
bulges: 1
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pre-miRNA
 ACTTTTTACTTGATCATTCGTCTTATTTAAAAAATTTAAGTAATTATTTGTTCTTTTCATATCATTTGATTCATTGTTAAATATACTTTCATGTACATAT
ATAGTTTTACATATTTCACAATTTTTTTTAATAAGACGAACGGTTAAACACGTGC

dot-bracket secondary structure
.........((((((.(((((((((((.((((((((.(((((..((((((.......((.(((....)))....)).)))))))))))..(((((.....
.......))))).......))))))))..))))))))))).))))))........


SIMILARITIES
miRBase osa-MIR806a: 2e-43

PMRD osa-miR806a: 2e-43

microPC miR806: 7e-31		UniProt no hits

RFAM MIR806: 2e-49		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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