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ABOUT THIS RECORD

ID: MNEST003914
species: Oryza sativa
miRNA family: MIR806
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTTGAATAAGACCAACGGTCA

miRNA*
CACATTCGTTTTATTCAAAAA

mismatches: 2
bulges: 2

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pre-miRNA
CTTATATAGTACTCCCTCCTTCCCTAAATATTTAACACCGTTGACTTTTTAAAACATGTTTGCACATTCGTTTTATTCAAAAACTTTTGTGATATGTGTA
AAACTCATATGTATACATAAAAGTCTATTTAACAATAAATCAAATGATAGAAAAAGCAATTAACAATTACTTAAATTTTTTGAATAAGACCAACGGTCAA
ATATTTTTTAAAAAGTCAACAGCGTCAAACATTTTCGGATGGCAGGTAGTACATATTT


dot-bracket secondary structure
........(((((.(((((.(((..((((.(((.((...(((((((((((((((.(((((((.((.((.((((((((((((((((((((((((((((((.
......)))))))).))))))))((((((................))))))..(((.((((...)))).)))....)))))))))))))).))..)))))
)))).)))))))))))))))...)).))).))))..))).)).))).)))))......



SIMILARITIES
miRBase osa-MIR806h: 4e-52

PMRD oru-miR806: 4e-55

microPC miR806: 7e-29
UniProt no hits

RFAM MIR806: 6e-82
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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