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ABOUT THIS RECORD
ID:
MNEST003931
species:
Oryza sativa
miRNA family:
MIRf341
source:
miRNEST
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ATGTAAGTCATTATAGCATTT
miRNA*
ATGCTAGAATGACTTACATTT
mismatches:
1
bulges:
0
View larger
pre-miRNA
TACTACTCCTTCCGTTTCACA
ATGTAAGTCATTATAGCATTT
TCCACATTTATAGTTGATTCATTAACATCAATATGGATGTGGGGA
ATGCTAGAATGAC
TTACATTT
TAAAACGAAGTAAGTACT
dot-bracket secondary structure
...((((.((((.((((...(
((((((((((((.((((((((
((((((((((((.(((((........)))))))))))))))))))
)))))).))))))
))))))).
..))))))))..))))..
SIMILARITIES
miRBase
osa-MIR809d
:
3e-17
PMRD
osa-miRf12016-akr
:
3e-17
microPC
miR809
:
0.000000006
UniProt
no hits
RFAM
MIR1122: 1e-29
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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