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ABOUT THIS RECORD

ID: MNEST003932
species: Oryza sativa
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
ATNTAAGTCATTCTAGCATTT

miRNA*
ATACTAGAATGACCTTATATTG

mismatches: 2
bulges: 1

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pre-miRNA
ATAAAATGNTTGCTGATTAATTNGTACTCCCTCCTTTCACAATNTAAGTCATTCTAGCATTTTCCNTATTTATATTGATGTTGATGATTCATCAACATCA
ATATAAATATGGAAAATACTAGAATGACCTTATATTGTGAAACGAAGGAAGTATATATGATCTNCCCGGTACATT


dot-bracket secondary structure
....((((.(((..(((((.(..(((((((.((.(((((((((.(((((((((((((.(((((((.((((((((((((((((((((...)))))))))))
))))))))).))))))).))))))))).)))).))))))))).)).)).)))))..))))))....)))..))))



SIMILARITIES
miRBase osa-MIR809d: 0.0000000000006

PMRD osa-miR809d: 0.0000000000006

microPC miR809: 0.000000009
UniProt no hits

RFAM MIR1122: 1e-26
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
Source sequences
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