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ABOUT THIS RECORD

ID: MNEST003935
species: Oryza sativa
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CTTTCTAGCATTGCCCATATG

miRNA*
 TGTGGGTAATGCTATAACGTC

mismatches: 3
bulges: 0
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pre-miRNA
 AGCGCTACTCCCTCCGTTTCATAATATAAGACTTTCTAGCATTGCCCATATGTATATATATGTCTAGATTCATTAACATCTATATGAATATATGAATGTG
GGTAATGCTATAACGTCTTACATTATAAAACGGAGGAAGTAACTA

dot-bracket secondary structure
.....((((.(((((((((.(((((.((((((.((.(((((((((((((((.(((((((.(((.(((((........))))).))).))))))).)))))
)))))))))).)).)))))).))))).))))))))).))))....


SIMILARITIES
miRBase osa-MIR819a: 5e-16

PMRD osa-miR819a: 5e-16

microPC miR1130: 0.0000000000001		UniProt no hits

RFAM MIR1122: 7e-25		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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