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ABOUT THIS RECORD

ID: MNEST003941
species: Oryza sativa
miRNA family: MIR482
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCTTCCCTACTCCTCCCACTC

miRNA*
GCGGGCGGCGGGGGCGGGGAG

mismatches: 4
bulges: 2

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pre-miRNA
TTCCCTTCTTCCCTACTCCTCCCACTCCACTCCACGCGCACCTCGCCGCGTCCCTGATCTGATTGATTGATGCCGGGGCGGCCGTGATGGCGGCGGGAGC
AGGAGCGGGCGGCGGGGGCGGGGAGGGC


dot-bracket secondary structure
..((((((((((((...((.(((.((((.((((.(((.(((.((((((((((...((((.....)))))))))...)))))..)))...)))...)))).
.)))).))).))..)))).)))))))).



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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