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ABOUT THIS RECORD

ID: MNEST003948
species: Oryza sativa
miRNA family: MIR812
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTGAATAAAACGAATGGTCAA

miRNA*
GAACGTTAATCTTATTCAAAA

mismatches: 5
bulges: 0

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pre-miRNA
TACTCCCTCCTTCCTTAAATATTTGACGCCGTTAACTTTTTTAAATATGTTTGAACGTTAATCTTATTCAAAAAATTTAAGTAATTATTAATTCTTTTCC
TATCATTTGATTCATTGTTAAATATACTACTACTACTCAAGTTTTTGAATAATATTCACAAAATTTTTGAATAAAACGAATGGTCAAACATGTTTAAAAA
AGTCAACGGCATCAAATATTTAGGGACGGAGCGAAT


dot-bracket secondary structure
...((.((((.(((((((((((((((.((((((.((((((((((((((((((((.((((....(((((((((((.(((.((((((..(((((........
.(((....))).....)))))..))..))))(((.....)))...(((((...))))).))).)))))))))))....)))).)))))))))))))))))
))).)))))).))))))))))))))).)))).))..



SIMILARITIES
miRBase osa-MIR806h: 4e-36

PMRD oru-miR806: 3e-43

microPC miR806: 2e-32
UniProt no hits

RFAM MIR806: 2e-97
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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