ABOUT THIS RECORDspecies: Oryza sativa
miRNA family: miR2927
source: miRNEST
Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CGTCGTCGTCGAGGGAGCCGG miRNA* GCCTCCCCGGCGGCGGCACG mismatches: 2 bulges: 1 |
pre-miRNA
CCGATGAAAGCCGCCTCCCCGGCGGCGGCACGGCGGGCCGTCGTCGTCCGGGCGTCGTCGTCGAGGGAGCCGGTGAGGAGGG
dot-bracket secondary structure
((.......((((.(((((((((((((((.((((((.......))).)))...)))))))))).))))).)))).....)).
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
CCGATGAAAGCCGCCTCCCCGGCGGCGGCACGGCGGGCCGTCGTCGTCCGGGCGTCGTCGTCGAGGGAGCCGGTGAGGAGGG
dot-bracket secondary structure
((.......((((.(((((((((((((((.((((((.......))).)))...)))))))))).))))).)))).....)).
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
