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ABOUT THIS RECORD

ID: MNEST003954
species: Oryza sativa
miRNA family: MIR1120
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ACTACCTCCGTCCCATAATAA

miRNA*
 ATTTTGGGACAGAGGTACTAC

mismatches: 3
bulges: 0
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pre-miRNA
 CATACATTATTACTACCTCCGTCCCATAATAATTTTATTTCTAGGATTCAAATTTGTTCCAAAATAGTTGTCACAATAGAGTACTAATTGTCCCATCAAT
CACTTCTTATTCAAATTTCTTCCTATTCTACCCTCAACCACCCTCCCGCTCTTGCATATACACCATTTAATGAGGGACACCATAGTCTTTCTCCTCAAAC
CTTAATATATGCTAAACAACTTAGAATTACAATTATTTTGGGACAGAGGTACTACATTTCATG

dot-bracket secondary structure
..........((.((((((.((((((.(((((((.((.((((((((..((....)).))).....((((((......(((((..................
...............................................))))).(((((((...........(((((((......))))))).........
.....)))))))...))))))))))).)).))))))).)))))).)))))).)).........


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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