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ABOUT THIS RECORD
ID:
MNEST003962
species:
Oryza sativa
miRNA family:
MIR806
source:
miRNEST
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ATGTGCTAAAAAGTCAATGGT
miRNA*
TATTGATCTTTTAACACATGT
mismatches:
3
bulges:
0
View larger
pre-miRNA
AATTACTCCCTCCGTTTCGTTTTATTTGATAC
TATTGATCTTTTAACACATGT
TTGACCGTTCATCTTATTCAAAAACTTTTGTAAAATATGTAAAACTA
TACGTATGCATAAAAGTATATTTAACAATGAATCAAATTATAAGAAAAAAATAAATAATTATTTAAATTTTTTTGAATAAAACAAACGGTTCAAAC
ATGT
GCTAAAAAGTCAATGGT
TGTCAATTAAAACGAAACCGGAGGGAGGA
dot-bracket secondary structure
.....(((((((((((((((((((.(((((((
(((((((.(((((.(((((((
(((((((((....((((((((((((((((((...(((((((......
)))))))..))))))))..((((((..((((...........................))))))))))..))))))))))....))))).))))))
))))
).))))).)))))))).
)))))).)))))))))).)))))))))..
SIMILARITIES
miRBase
osa-MIR806e
:
3e-25
PMRD
oru-miR806
:
1e-27
microPC
miR806
:
2e-59
UniProt
no hits
RFAM
MIR806: 1e-49
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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