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ABOUT THIS RECORD

ID: MNEST003997
species: Oryza sativa
miRNA family: MIRf34
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TATGGGACGGAGGGAGTACAT

miRNA*
TTACTCCCTCCATCCCGAAAA

mismatches: 5
bulges: 0

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pre-miRNA
TGCTAATCCTTTTACTCCCTCCATCCCGAAAAAAATGAATCTAGGACTGGATGTGACACATTTAGTACAACGAATCTGGACAGAGGTATGTCTAGATTCA
TAGTACTAGGATGTGTCACACCAGTACTAGGTTGGTTTTTTATGGGACGGAGGGAGTACATCAGAAATT


dot-bracket secondary structure
............((((((((((.(((((.(((((((.(((((((.(((((.(((((((((((((((((...(((((((((((......))))))))))).
..)))))).)))))))))))))))).))))))).))))))).))))).))))))))))...........



SIMILARITIES
miRBase osa-MIR1442: 2e-16

PMRD osa-miR1442: 2e-16

microPC miR1436: 4e-17
UniProt no hits

RFAM MIR1122: 4e-48
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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