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ABOUT THIS RECORD
ID:
MNEST004004
species:
Oryza sativa
miRNA family:
MIRf35
source:
miRNEST
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TAATCCCTTGTATTATGGGAC
miRNA*
CCCATAATATAAGGGATTTTG
mismatches:
1
bulges:
0
View larger
pre-miRNA
GTAGTACTCCCTCCGT
CCCATAATATAAGGGATTTTG
GACAGATGTGAGACGTCCAGATTCATTGTATTAGGATGTGTCACATCTACCCA
TAATCCCTTG
TATTATGGGAC
TGAGGGAGTACTA
dot-bracket secondary structure
.((((((((((((.((
((((((((((((((((((.((
(..((((((((.((((((.(((.......))).)))))).))))))))..)))
.)))))))))
)))))))))))
.))))))))))))
SIMILARITIES
miRBase
osa-MIR1442
:
0.00000000000003
PMRD
osa-miR1442
:
0.00000000000003
microPC
miR1436
:
0.000002
UniProt
no hits
RFAM
MIR1122: 6e-65
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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