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ABOUT THIS RECORD
ID:
MNEST004010
species:
Oryza sativa
miRNA family:
MIRf528
source:
miRNEST
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AGGATGTATCACATCTAGTTT
miRNA*
ACCAGATATGATATATTCTAG
mismatches:
2
bulges:
0
View larger
pre-miRNA
ATCTAGG
ACCAGATATGATATATTCTAG
TACGATAAATCTAGATATATGTATGTACTGATTTGTAGTACT
AGGATGTATCACATCTAGTTT
TTTA
dot-bracket secondary structure
.....((
((.((((.(((((((((((((
(((.(((((((...((((....))))...))))))).)))))
))))))))))).)))).))))
....
SIMILARITIES
miRBase
no hits
PMRD
osa-miRf10251-akr
:
0.0003
microPC
miR816
:
0.00007
UniProt
no hits
RFAM
MIR1122: 0.000000000000001
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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