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ABOUT THIS RECORD

ID: MNEST004161
species: Oryza sativa
miRNA family: MIR819
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCAGGTTATAAGACTTTCTAT

miRNA*
AGAAAGTCTTATAATACAAAG

mismatches: 4
bulges: 0

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pre-miRNA
GTTATTACTACCTCTATTTCAGGTTATAAGACTTTCTATCATTGCCTACATTTATATAGATGGTAGATAATTTAGGCACATATATGTCTAGATTCATTAA
CATATATATGAATGTGGGCAATGCTAGAAAGTCTTATAATACAAAGCGGAGGAAGTATTTA


dot-bracket secondary structure
.....((((.(((((.(((...((((((((((((((((.(((((((((((((((((((.(((.(((..((((((((((......))))))))))..))).
))).))))))))))))))))))).))))))))))))))))...))).))))).))))....



SIMILARITIES
miRBase osa-MIR819j: 1e-47

PMRD osa-miR819j: 1e-47

microPC miR819: 1e-23
UniProt no hits

RFAM MIR1122: 8e-31
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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