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ABOUT THIS RECORD

ID: MNEST004163
species: Oryza sativa
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TAAGACTTTCTAGCATTGCCC

miRNA*
CATATGCTAGAAAGTCTTATA

mismatches: 5
bulges: 0

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pre-miRNA
TTGACTTCTACTAGTTACTTCCTCTGTTTCAGGTTATAAGACTTTCTAGCATTGCCCACATTCATATGCTAGAAAGTCTTATAACCTGAAATGGTGGTAG
TATATAATAAAATAAT


dot-bracket secondary structure
........((.((..((((.((.(((((((((((((((((((((((((((((.............))))))))))))))))))))))))))))).)).))
))..)).)).......



SIMILARITIES
miRBase osa-MIR819d: 7e-21

PMRD osa-miR819d: 7e-21

microPC miR819: 1e-28
UniProt no hits

RFAM MIR1122: 1e-16
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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