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ABOUT THIS RECORD
ID:
MNEST004354
species:
Oryza sativa
miRNA family:
MIRf341
source:
miRNEST
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CTACTCTCTCCGTCCCAAAAA
miRNA*
TTTGACAGAGAAAGTATGC
mismatches:
4
bulges:
2
View larger
pre-miRNA
TGGAGACGTAGACTAGAAGATGAGCAACTTA
CTACTCTCTCCGTCCCAAAAA
AAGCCAATCCTCTCCTAGTAGAACGATTCTGGATTATACTAGGAGGGG
TCATATTTTTAGATAGGGTTTAT
TTTGACAGAGAAAGTATGC
AGTTAATATTTTTATTTCTTTTTACTAT
dot-bracket secondary structure
.......(((((..(((((..(((.((((..
.((((.((((.(((..((((.
(((((...((((((((((((....((((...)))).))))))))))))
...((((....)))).))))).)
)))))).)))).))))...
)))).....)))..))))).)))))...
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
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