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ABOUT THIS RECORD

ID: MNEST004356
species: Oryza sativa
miRNA family: MIR1132
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TATTATGGGACGGAGGGAGTA

miRNA*
 CTCTCTCCGTCCCATAATATA

mismatches: 0
bulges: 0
View larger
pre-miRNA
 TTGATGAATATTACTCTCTCCGTCCCATAATATAAGGGATTTTGAGTTTTGCTTGTAAGTGTTTGACCACTCGTCTTATTCAAATAATTTATGCAAATAT
AAAAAACGAAAAGTTATGTGTAAAGTATTTTTGGNATAATAAAGTAAGTCACAAAAAAGTAAATAATGATTCCAATTTTTTTTAATAAGACGAGTGGTCA
AACCGTATAAGTAAAAACTCAAAATCACTTATATTATGGGACGGAGGGAGTAAATACCAAGA

dot-bracket secondary structure
..........((((((((((((((((((((((((((.((((((((((((((((((((...((((((((((((((((((((.(((((.((((((((.....
................)))))))).))))).(((..((......))..))).((((((((..............)))))))).)))))))))))))))))
)))..))))))).))))))))))))).)))))))))))))))))))))))))).........


SIMILARITIES
miRBase osa-MIR818e: 0.000000000000004

PMRD osa-miR818e: 0.000000000000004

microPC miR818: 0.000000004		UniProt no hits

RFAM MIR806: 2e-29		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
Source sequences
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