ABOUT THIS RECORDspecies: Oryza sativa
miRNA family: MIRf34
source: miRNEST
Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTGCTATATTTTGGGACGGGG miRNA* CCGTCCTAAAATATAAGATT mismatches: 1 bulges: 1 |
pre-miRNA
GGTACTCTCTCCGTCCTAAAATATAAGATTTTTATTTATGAATGTCCAGATTCATAACTAAAAATTGCTATATTTTGGGACGGGGTAGTAGTTA
dot-bracket secondary structure
..((((..(((((((((((((((((.((((((((.((((((((......)))))))).))))))))..))))))))))))))))).))))....
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GGTACTCTCTCCGTCCTAAAATATAAGATTTTTATTTATGAATGTCCAGATTCATAACTAAAAATTGCTATATTTTGGGACGGGGTAGTAGTTA
dot-bracket secondary structure
..((((..(((((((((((((((((.((((((((.((((((((......)))))))).))))))))..))))))))))))))))).))))....
SIMILARITIES| miRBase osa-MIR1439: 0.00000000007 PMRD osa-miR1439: 0.00000000007 microPC no hits | UniProt no hits RFAM MIR1122: 0.0000000000004 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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