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ABOUT THIS RECORD

ID: MNEST004544
species: Oryza sativa
miRNA family: MIRf315
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GAATAAGTTCACCGGAGGTCC

miRNA*
ACCTTCGGTGTACTTTTCCT

mismatches: 1
bulges: 1

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pre-miRNA
GTAACCCGATTACAAGTTGATGGACCTTCGGTGTACTTTTCCTAGGCTAACTAACTAGGCTTGTGTAGGGACAAGGCTTTGGCCCAAAAAAAAAAGGAAT
AAGTTCACCGGAGGTCC
CTCAACTTAACAGCGAGATT


dot-bracket secondary structure
((((.....)))).((((((.((((((((((((.(((((((((.((((((.......(((((.(((....))))))))))))))..........))))).
)))).))))))))))))
.)))))).............



SIMILARITIES
miRBase no hits

PMRD osa-miRf10116-akr: 0.0000000000005

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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