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ABOUT THIS RECORD

ID: MNEST004550
species: Oryza sativa
miRNA family: MIR395
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GTGAAGTGTTTGGAGGAACTC

miRNA*
GTTCCTTTCAAGCACTTTACGA

mismatches: 0
bulges: 1

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pre-miRNA
CTAGGAGTTCCTTTCAAGCACTTTACGACACACCGTATTGAGAGTTGTCGTGAAGTGTTTGGGGGAACTCTTAGTGTCGCCAAGCATTTAAGTAGATAGT
GTTTAAACTACAAGAAATGAGAGAAACGTTTGGTATTATCAAGAGTTCTCTTTAAGCACTTCATACGACACCATTATTTATAGGGTTGTTGTGAAGTGTT
TGGAGGAACTC
TCA


dot-bracket secondary structure
...((((((((((.((((((((((((((((.(((.(((.((.((((((((((((((((((((((((((((((.(((..(((((((.(((...((..((((
......)))).......))....))).)))))))..))).)))))))).)))))))))))))..))))))..))).)).))).)))))))))))))))))
)))))))))))
)..



SIMILARITIES
miRBase osa-MIR395c: 3e-40

PMRD osa-miR395c: 3e-40

microPC miR395: 9e-62
UniProt no hits

RFAM mir-395: 5e-39
most similar mature miRNAs

Identical with: miR395 from microPC (MNEST044990)

MORE

miRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
Source sequences
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