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ABOUT THIS RECORD

ID: MNEST004557
species: Oryza sativa
miRNA family: MIR1436
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTATTTTGGGACGGAGGGAAT

miRNA*
TCCCTTCATTCCAAATAAAC

mismatches: 3
bulges: 1

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pre-miRNA
TTAATACCTACTCCCTTCATTCCAAATAAACCACCTACTAAGCATGTGACACATCCTAGTACCAGGTTGGTTTATTTTGGGACGGAGGGAATACCATCTT


dot-bracket secondary structure
...........(((((((.(((((((((((((((((((((.(.((((...)))).)))))...))).))))))).))))))).)))))))..........



SIMILARITIES
miRBase osa-MIR1862a: 0.00000000000002

PMRD osa-miR1862a: 0.00000000000002

microPC miR1862: 3e-32
UniProt no hits

RFAM MIR1122: 1e-37
most similar mature miRNAs

Identical with: miR1862 from microPC (MNEST046671)

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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