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ABOUT THIS RECORD

ID: MNEST004753
species: Oryza sativa
miRNA family: MIR1439
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTTTGGAACGGAGGGAGTACA

miRNA*
TACTTCCTCCGTCCCAAAAAA

mismatches: 3
bulges: 0

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pre-miRNA
CAACTAGCTGGATACTTCCTCCGTCCCAAAAAAAAAGGCAAACCCTGGGTTTTCGTGTCCAACTTTAACGATGGACGGTCAAACGTTGGACACGGAAACC
AGGGTTTGTTTTTTTTTGGAACGGAGGGAGTACATATGACAAG


dot-bracket secondary structure
............((((((((((((.((((((((((..(((((((((((.((((((((((((((.((...(((.....))).)).))))))))))))))))
))))))))))))))))))).))))))))))))...........



SIMILARITIES
miRBase osa-MIR812c: 0.000002

PMRD osa-miRf11036-akr: 0.0000000001

microPC no hits
UniProt no hits

RFAM MIR806: 0.0000000005
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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