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ABOUT THIS RECORD
ID:
MNEST004761
species:
Oryza sativa
miRNA family:
MIRf198
source:
miRNEST
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GCGCTGAACTTAGACACTTCA
miRNA*
AGGTGTCTTAGGTTCAGCGCCC
mismatches:
0
bulges:
1
View larger
pre-miRNA
CAAATCCCCGG
GCGCTGAACTTAGACACTTCA
GCGCCATGTCCACTGGCGCTGGAAGGCGTGCCACCGCGGATGGGAGACTAAGTCACCTTGCCAATGCA
TATTTAGCGTCCCCCTATTTGGGCGCTG
AGGTGTCTTAGGTTCAGCGCCC
AGGGGTTT
dot-bracket secondary structure
.(((((((.((
(((((((((((((((((((((
(((((.........(((((((((..((((((....))((..(((.(((...))).)))..)).)))).
..)))))))))..........)))))))
))))))).))))))))))))))
.)))))))
SIMILARITIES
miRBase
osa-MIR2122
:
0.00000000000003
PMRD
osa-miRf10607-akr
:
2e-22
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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