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ABOUT THIS RECORD

ID: MNEST004761
species: Oryza sativa
miRNA family: MIRf198
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GCGCTGAACTTAGACACTTCA

miRNA*
AGGTGTCTTAGGTTCAGCGCCC

mismatches: 0
bulges: 1

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pre-miRNA
CAAATCCCCGGGCGCTGAACTTAGACACTTCAGCGCCATGTCCACTGGCGCTGGAAGGCGTGCCACCGCGGATGGGAGACTAAGTCACCTTGCCAATGCA
TATTTAGCGTCCCCCTATTTGGGCGCTGAGGTGTCTTAGGTTCAGCGCCCAGGGGTTT


dot-bracket secondary structure
.(((((((.((((((((((((((((((((((((((((.........(((((((((..((((((....))((..(((.(((...))).)))..)).)))).
..)))))))))..........)))))))))))))).)))))))))))))).)))))))



SIMILARITIES
miRBase osa-MIR2122: 0.00000000000003

PMRD osa-miRf10607-akr: 2e-22

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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