ABOUT THIS RECORDspecies: Mus musculus
miRNA family: mir-488
source: miRNEST
Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTGAAAGGCTATTCCTTGGTC miRNA* TCAAGGGTTCCCTTCCAAGG mismatches: 4 bulges: 1 |
pre-miRNA
GTGATCTTCTGGATCAAGGGTTCCCTTCCAAGGGCTTTTTGAAAGGCTATTCCTTGGTCAGTTTTCACC
dot-bracket secondary structure
((((....(((.((((((((...((((.((((.....)))).))))....)))))))))))...)))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GTGATCTTCTGGATCAAGGGTTCCCTTCCAAGGGCTTTTTGAAAGGCTATTCCTTGGTCAGTTTTCACC
dot-bracket secondary structure
((((....(((.((((((((...((((.((((.....)))).))))....)))))))))))...)))).
SIMILARITIES| miRBase cfa-mir-488: 0.0002 PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
