miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST005230
species: Sus scrofa
miRNA family: miR-4198
source: miRNEST

Taxonomy by NCBI:
Sus scrofa Sus Suidae Suina Cetartiodactyla Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AATGATGTTATTTTAGAGGTG

miRNA*
CTGGAGGTGATATCTGTCA

mismatches: 4
bulges: 2

View larger
pre-miRNA
GAGTCTAGTGCCAAAGGAGAAATATGACAAAAATGATGTTATTTTAGAGGTGACATCTGGAAGAACTACTGGAGGTGATATCTGTCAACAGTTTACCCGG
GAAATATTTGATATG


dot-bracket secondary structure
..(((.((((((...((..((((.(((((.....(((((((((((...((((...(((...)))..)))).))))))))))))))))...))))..)).)
)...)))).)))...



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt sp|O75570|RF1M_HUMAN: 0.000000000000005

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record





Liczniki na strone;