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ABOUT THIS RECORD

ID: MNEST005231
species: Sus scrofa
miRNA family: mir-1224
source: miRNEST

Taxonomy by NCBI:
Sus scrofa Sus Suidae Suina Cetartiodactyla Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCCCACGTCCTCTCTCCTCAT

miRNA*
GACAAGAGAGAACGGGATT

mismatches: 3
bulges: 2

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pre-miRNA
AGTTTAAAGAGGTGACAAGAGAGAACGGGATTCCAGAAGAAAATATTGTGAACATCATCAAACTGATGCAACACGAAGAACCAGGCATTGCCATTGCTCC
ATGGAATCAATACCAATGACCCACATGCCTGGTTCCTGCCTCTTATAATCCTGCTCTGCCCATGATTATCCCACGTCCTCTCTCCTCATCCCTTAATCA


dot-bracket secondary structure
......(((.(((((..((((((.(((((((..((..(((.....(((((..(((((......)))))...))))).(((((((((((((.(((((....
.............)))))...)).)))))))))))..((.............))))).....))...)))))..)).))))))..))))).))).....



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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