ABOUT THIS RECORDspecies: Danio rerio
miRNA family: miR-1951
source: miRNEST
Taxonomy by NCBI:
Danio rerio Danio Cyprinidae Cyprinoidea Cypriniformes Cypriniphysi Otophysi Ostariophysi Otocephala Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GCAGTGGAGACTGGTGTGGTT miRNA* CTACTACCTGTCTGTGCTGCCA mismatches: 2 bulges: 1 |
pre-miRNA
TGCATGTGTAAACTACTACCTGTCTGTGCTGCCATTCATGGCGGCAGTGGAGACTGGTGTGGTTAGCATCTGA
dot-bracket secondary structure
..((.((((.((((((.(((.((((.(((((((.........))))))).)))).))))))))).)))).)).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TGCATGTGTAAACTACTACCTGTCTGTGCTGCCATTCATGGCGGCAGTGGAGACTGGTGTGGTTAGCATCTGA
dot-bracket secondary structure
..((.((((.((((((.(((.((((.(((((((.........))))))).)))).))))))))).)))).)).
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|Q4QRF7|CF058_DANRE: 0.0002 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
