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ABOUT THIS RECORD

ID: MNEST005478
species: Danio rerio
miRNA family: miR-1951
source: miRNEST

Taxonomy by NCBI:
Danio rerio Danio Cyprinidae Cyprinoidea Cypriniformes Cypriniphysi Otophysi Ostariophysi Otocephala Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GCAGTGGAGACTGGTGTGGGT

miRNA*
CTACTACCTGTCTGTGCTGCCA

mismatches: 4
bulges: 1

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pre-miRNA
ATGCGTAAACTACTACCTGTCTGTGCTGCCATTCCTGGCGGCAGTGGAGACTGGTGTGGGTAGCAACGGA

dot-bracket secondary structure
.(((.....((((.(((.((((.(((((((.........))))))).)))).)))))))...))).....


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt sp|Q4QRF7|CF058_DANRE: 0.0001

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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