ABOUT THIS RECORDspecies: Triticum aestivum
miRNA family: MIR2002
source: miRNEST
Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGAGATGAGATTACCCCATAC miRNA* AGGGGGCAATCTCACCTCAAC mismatches: 3 bulges: 0 |
pre-miRNA
TTTTCTCTCTGTAGCGGCCGTTGAGATGAGATTACCCCATACCCTATAGCGGCAGCTCGACTCCGCACACGCGTAGGGGGCAATCTCACCTCAACAGCTG
CTCTCAGTGAGCT
dot-bracket secondary structure
....(((.(((.((((((.((((((.(((((((.((((.(((......((((.((.....))))))......))).)))).))))))).)))))).))))
))..))).)))..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TTTTCTCTCTGTAGCGGCCGTTGAGATGAGATTACCCCATACCCTATAGCGGCAGCTCGACTCCGCACACGCGTAGGGGGCAATCTCACCTCAACAGCTG
CTCTCAGTGAGCT
dot-bracket secondary structure
....(((.(((.((((((.((((((.(((((((.((((.(((......((((.((.....))))))......))).)))).))))))).)))))).))))
))..))).)))..
SIMILARITIES| miRBase no hits PMRD tae-miR2002: 9e-42 microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
