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ABOUT THIS RECORD

ID: MNEST006733
species: Gallus gallus
miRNA family: miR-3195
source: miRNEST

Taxonomy by NCBI:
Gallus gallus Gallus Phasianinae Phasianidae Galliformes Neognathae Aves Coelurosauria Theropoda Saurischia Dinosauria Archosauria Sauria Sauropsida Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CGCGCCGGGCCCGGGGCTTCT

miRNA*
AAGCCCCCATCCCCGGCGCCGCT

mismatches: 4
bulges: 2

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pre-miRNA
TGTGGCGTACGGAAGCCCCCATCCCCGGCGCCGCTCTCGGGGGGCCCAAGTCCTTCTGATCGAGGCCCAGCCCGCGGACGGTGTGAGGCCGGTAGCGGCC
CCCCGGCGCGCCGGGCCCGGGGCTTCTCGGAGTCGG


dot-bracket secondary structure
..((((...((((((((((....((((((((.((...(((((((((.....((.((.....))((((..(((((....))).))..))))))....))))
)))))))))))))))...)))))))).))..)))).



SIMILARITIES
miRBase mmu-mir-5105: 3e-26

PMRD no hits

microPC no hits
UniProt no hits

RFAM SSU_rRNA_eukarya: 1e-50
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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