ABOUT THIS RECORDspecies: Gallus gallus
miRNA family: miR-1608
source: miRNEST
Taxonomy by NCBI:
Gallus gallus Gallus Phasianinae Phasianidae Galliformes Neognathae Aves Coelurosauria Theropoda Saurischia Dinosauria Archosauria Sauria Sauropsida Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGGGACAGTGGCTGCGCCCTCT miRNA* AGGGCTCAGCAGCTGTGCCCGTG mismatches: 2 bulges: 1 |
pre-miRNA
TGCCCCCGGGATGGGACAGTGGCTGCGCCCTCTGTGAAGGGAACGGAGGGCTCAGCAGCTGTGCCCGTGCCTGGCAG
dot-bracket secondary structure
((((...(((((((((((((.((((.(((((((((.......))))))))).)))).))))).))))).))))))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
Source sequences
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TGCCCCCGGGATGGGACAGTGGCTGCGCCCTCTGTGAAGGGAACGGAGGGCTCAGCAGCTGTGCCCGTGCCTGGCAG
dot-bracket secondary structure
((((...(((((((((((((.((((.(((((((((.......))))))))).)))).))))).))))).))))))).
SIMILARITIES| miRBase gga-mir-1608: 5e-36 PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
Source sequences
download this record
