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ABOUT THIS RECORD

ID: MNEST006758
species: Gallus gallus
miRNA family: mir-1268
source: miRNEST

Taxonomy by NCBI:
Gallus gallus Gallus Phasianinae Phasianidae Galliformes Neognathae Aves Coelurosauria Theropoda Saurischia Dinosauria Archosauria Sauria Sauropsida Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AGTGCGTGGTGGTGGGGGACG

miRNA*
TCTTCGACCACTACGCAGTCA

mismatches: 3
bulges: 0

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pre-miRNA
GCAGCGCCGCGGTCATGCTGAAGTGCGTGGTGGTGGGGGACGGCGCCGTGGGCAAGACGTGCCTGCTGATGAGCTACGCCAACGACGCCTTCCCTGAGGA
GTACGTGCCCACCGTCTTCGACCACTACGCAGTCAGCGTTACCGTGGAGGGCA


dot-bracket secondary structure
((....(((((((.(((((((..(((((((((((.((((((((.((.(((((((.....)))))))...((.((...))))(((((.((((....)))).
)).)))))...)))))))).))))))))))).))))))).)))))))...)).



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt sp|Q9JJL4|RHOQ_RAT: 2e-20

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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