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ABOUT THIS RECORD

ID: MNEST006789
species: Gallus gallus
miRNA family: miR-7
source: miRNEST

Taxonomy by NCBI:
Gallus gallus Gallus Phasianinae Phasianidae Galliformes Neognathae Aves Coelurosauria Theropoda Saurischia Dinosauria Archosauria Sauria Sauropsida Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CAACAAATCACAGTCTGCCAT

miRNA*
GGAAGACTAGTGATTTTGTTGTT

mismatches: 1
bulges: 2

View larger
pre-miRNA
GATTTCAGTGGATGTTGGTCTAGTTCTGTGTGGAAGACTAGTGATTTTGTTGTTTTTAGATAATTAAATTGACAACAAATCACAGTCTGCCATATGGCAC
AGATCATGCCTCTACAGGACA


dot-bracket secondary structure
...(((.(((((.((.(((((.((.((((((((.(((((.(((((((.(((((((((((....)))))..)))))))))))))))))).)))))))).))
)))))..)).))))).)))..



SIMILARITIES
miRBase gga-mir-7-1: 3e-57

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-7: 3e-45
most similar mature miRNAs

Identical with: gga-mir-7-1 from miRBase (MNEST025883)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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