ABOUT THIS RECORDspecies: Gallus gallus
miRNA family: miR-221
source: miRNEST
Taxonomy by NCBI:
Gallus gallus Gallus Phasianinae Phasianidae Galliformes Neognathae Aves Coelurosauria Theropoda Saurischia Dinosauria Archosauria Sauria Sauropsida Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ACCTGGCATACAATGTAGATT miRNA* GCTACATTGTCTGCTGGGTTT mismatches: 4 bulges: 0 |
pre-miRNA
TTGGGGCATGAACCTGGCATACAATGTAGATTTCTGTGTTTGTTAAGCAACAGCTACATTGTCTGCTGGGTTTCCAGCTGC
dot-bracket secondary structure
....(((..((((((((((.(((((((((.......(((((...)))))....))))))))).))))))))))...)))..
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TTGGGGCATGAACCTGGCATACAATGTAGATTTCTGTGTTTGTTAAGCAACAGCTACATTGTCTGCTGGGTTTCCAGCTGC
dot-bracket secondary structure
....(((..((((((((((.(((((((((.......(((((...)))))....))))))))).))))))))))...)))..
SIMILARITIES| miRBase gga-mir-221: 9e-41 PMRD no hits microPC no hits | UniProt no hits RFAM mir-221: 6e-33 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
